Yes. Use the Tables management tab on the cross-match web page to upload your own table.
Currently, we support VOTable, FITS table and CSV as the table input format. If your table is in another format, we suggest using TOPCAT to convert it to VOTable.
Here is an example of a simple table you can upload :
RA,DEC 2.514167,+46.39083 4.107500,+53.945278 4.172083,+54.660556 4.626250,+26.139167 7.465000,+38.324167 9.805417,+3.134167 10.665417,+71.366944 233.190417,+68.866667 113.448750,+52.689444